Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943028.1_cds_XP_016486333.1_77177
CDS Infomation

[gene=LOC107806648] [db_xref=GeneID:107806648] [protein=phosphatidate phosphatase PAH1-like isoform X3] [protein_id=XP_016486333.1] [location=join(12082..13339,13431..14041,14143..14216,14615..14699,20917..20989,21792..21835,21930..22058,22155..22253,22658..22717)] [gbkey=CDS]
Sequence

ATGAATGTTGTTGGTAAAGTTAGCAGCTTTATAACACAAGGTGTGTACTCAGTTGCCACT
CCATTTCATCCTTTTGGTGGAGCTGTTGACATAATTGTTGTGAAGCAGCAGGATGGGACT
TTTAGGAGCACCCCTTGGCATGTTCGATTCGGGAAATTTCAGGGTGTCCTTAAAGGGGCA
GAAAAAGTTGTCCGAATTGAAGTTAATGGCGTAGAAGCTGATTTTCACATGTACCTTGAT
AATTCAGGTGAAGCATATTTTATCAGAGAGGTTTCTACTGGTAATGAGAGCGAAACAAAT
GGGGATTCAAAGGATTTTGATTGTCAAAAAGGGGAAGTGAATGCTAGTGATCTTGATAGA
GTTAACAACGGAGAAAGTATAACGGATGGTGCTCTGTCCACACATGATAATAATGATTCT
AATGAAGCTGATTTACCATCGCGAGATGAAGGTGTGACATTGGGTAATGAGCTAGTGGAA
TTTGGTTCCAGCAGATATGAGAATTTGGATAATGTAGATGAGGTGTTAGAATCGCAGGAC
CCCGGTTCTGAAGTTGTGATGGTGAGTGTGGATGGCCATATCTTGACAGCACCCATCTCA
TCATCGGAAAGGAATGTGGAAGATGTCAAATTAAACACGCCTAGGTTTAATCTAGGCCCT
GGTCAGGGGACAGATTTATTTGATGGTAACTCAGAGTTCATCACAGGTGAAGCTACATGG
GCTGATGATTATTCGAGTGATCAGGAGACCCCAAACGATGCTCCTGCAGATGCGTGCAAT
GTGAAGAACGAGAGCAATACGGTTGAGCACCAGCTAAATGTTTCTGATGTAGATGGTCAA
TTTAGAGTAAATTTGGATGTGAAGAACCAGGAAAATGGCCATGTGGAGGTTACATCATTT
GGCAATAAGAAGGATAATGTTTCTCCAGTGAAGATTCTGGAAGGGGTTGACGATTTAGAG
AAGAAGTGTCCTGGGAAACTGGGAAACAACAGTTTGTTAAATCCTAGTACTGACCGTCCC
TGCAGTTCTCCTTCACCAGATTTAAAGCTTCAATGTAAAACCCTTCAGAAATGTGAGTCA
GTGATGGATTGTAATGGTTCTGATGGCTCAATAGACCATCAGGCTGTTAGTGATAAACAT
CCAGAGGAACAGCATGATGTATTTTTAGCAGCTGAAGAAATAAAAAGTGTCCAGCAAGAA
CTAGATGAATGTTCTCAATGTGAAAATTCGAAGCGTCTTATAGAAGCTTTTCTCAAAGTA
ATAGCTACAGGAGTAGAGATATCTCTTTGTGGCAACTTGCTTTATGCTGGAATGGGTTCT
AGTGCTGCAAGAGAAACCTTTGATGCTAATCGCATATCTGAGGATGAATTCAGAAGTTCT
TCAGAATCCATAATCAAGAACAAGAATTTAGTTGTCAGAATTCGAGGAAACTATTTTTCG
TGGGATAGAGCTGCTCCTATCATTCTTGGCATGGCCGAATGTGATATGGAATTGCCTATT
GAATGTGCTGAAATCATACCTGTGGAACGGGAGGAGATCTCAAAATCAGGAGAGGATAAT
AGTGGGATCTCTTCGGTTGCTTCTGGGCGGCGATGGACTCTCTGGCCAAATCCATTTAGA
AGGGTTAAGACACTTGAGGACAGTAACTGTAATTTATCAAATGAAGAGGTCTTTGTTGAT
TCTGCATCTAGCTCAATGTACCAGCCTATAGAACCAACAGATATCACACAAGGAGGCAAG
GAATCTCCTCAGGAGCAACTTGTGAGAACAAATATTCCCACTTCCGGTCAAATCACGTCT
TTGAACCTGAAGGAGGGGCAGAATATGGTAACCTTCATTTTCTCAACCCGAGTCCTGGGA
GAGCAAAAGGTCGAATCCCATATATATTTGTGGAAGTGGAATGCACAAATTGTAATTTCT
GATGTTGATGGGACTATTACCAAGTCCGATGTTCTTGGTCAGTTTATGCCTTTGGTTGGG
AAGGACTGGACACATTTTGGAACTGCCAGACTTTTCTCTGCAATCAAGGATGGAAAAACT
CTACCCAGCGGACCTGTTGTGATTTCTCCCGACGGTTTATTTCCATCATTGTACAGAGAA
GTTATAAGAAGAGCTCCTCATGAATTCAAGATTGCATGCTTAGAGGACATCAAAGCACTT
TTCCCACAAGATTACAACCCATTTTACGCAGGCTTTGGGAATAGGGACACTGATGAATTC
AGTTACAGAAAAATTGGAATTCCCAAAGGCAAAATTTTTATAATCAACCCAAAGGGGGAG
GTATCAATTAATCATCAAATTGATGTGAAATCCTATACTTCATTGCACACTCTTGTTGAT
GACATGTTCCCACCAACATCCAAGGTTGAGCAGGAAGATTTTAACGCATGGAACTTTTGG
AAAATGCCCATCTCAGATATCAATTACTTGTAG

Peptide Sequence

PEP ID

XP_016486333.1
PEP Infomation

PREDICTED: phosphatidate phosphatase PAH1-like isoform X3 [Nicotiana tabacum]
Sequence

MNVVGKVSSFITQGVYSVATPFHPFGGAVDIIVVKQQDGTFRSTPWHVRFGKFQGVLKGA
EKVVRIEVNGVEADFHMYLDNSGEAYFIREVSTGNESETNGDSKDFDCQKGEVNASDLDR
VNNGESITDGALSTHDNNDSNEADLPSRDEGVTLGNELVEFGSSRYENLDNVDEVLESQD
PGSEVVMVSVDGHILTAPISSSERNVEDVKLNTPRFNLGPGQGTDLFDGNSEFITGEATW
ADDYSSDQETPNDAPADACNVKNESNTVEHQLNVSDVDGQFRVNLDVKNQENGHVEVTSF
GNKKDNVSPVKILEGVDDLEKKCPGKLGNNSLLNPSTDRPCSSPSPDLKLQCKTLQKCES
VMDCNGSDGSIDHQAVSDKHPEEQHDVFLAAEEIKSVQQELDECSQCENSKRLIEAFLKV
IATGVEISLCGNLLYAGMGSSAARETFDANRISEDEFRSSSESIIKNKNLVVRIRGNYFS
WDRAAPIILGMAECDMELPIECAEIIPVEREEISKSGEDNSGISSVASGRRWTLWPNPFR
RVKTLEDSNCNLSNEEVFVDSASSSMYQPIEPTDITQGGKESPQEQLVRTNIPTSGQITS
LNLKEGQNMVTFIFSTRVLGEQKVESHIYLWKWNAQIVISDVDGTITKSDVLGQFMPLVG
KDWTHFGTARLFSAIKDGKTLPSGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKAL
FPQDYNPFYAGFGNRDTDEFSYRKIGIPKGKIFIINPKGEVSINHQIDVKSYTSLHTLVD
DMFPPTSKVEQEDFNAWNFWKMPISDINYL

Transcript Sequence

Gene sequence data has not been registered.